Cre06.g297150

Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor

Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g297150

Target	Alias	Description	ECC score	Gene Family Method
Adi_g026321	No alias	germ cell differentiation factor *(RKD) & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene71267.t1	Aspi01Gene71267	germ cell differentiation factor *(RKD) & original...	0.02	OrthoFinder output from all 47 species
Ore_g16859	No alias	SMARCF component *(LFR) of SWI/SNF chromatin remodeling...	0.01	OrthoFinder output from all 47 species
Pnu_g06440	No alias	SMARCF component *(LFR) of SWI/SNF chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024068	No alias	germ cell differentiation factor *(RKD) & original...	0.01	OrthoFinder output from all 47 species
Spa_g04577	No alias	germ cell differentiation factor *(RKD) & original...	0.02	OrthoFinder output from all 47 species
Tin_g20070	No alias	germ cell differentiation factor *(RKD) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0070403	NAD+ binding	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:1990380	K48-linked deubiquitinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003035	RWP-RK_dom	1767	1814

External Links

No external refs found!