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  5. Cre06.g293700

Cre06.g293700


Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL7/L12 component


Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g293700

Target Alias Description ECC score Gene Family Method Actions
AT4G37660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 OrthoFinder output from all 47 species
Adi_g029034 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g11519 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.29G035500.1 Ceric.29G035500 not classified & original description: pacid=50624913... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020704.55 No alias 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea 0.02 OrthoFinder output from all 47 species
LOC_Os02g10540.1 LOC_Os02g10540 component mtRPL7/L12 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Ore_g05998 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e012092_P001 Zm00001e012092 component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e026468_P001 Zm00001e026468 component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e035594_P001 Zm00001e035594 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 125 190
No external refs found!