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  5. Cre06.g290950

Cre06.g290950 (RPS5B, ATRPS5B)


Aliases : RPS5B, ATRPS5B

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS5 component


Gene families : OG0000325 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g290950
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g008238 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g033413 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g042535 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g077239 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g104601 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Als_g46680 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Aop_g63213 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Cba_g51974 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ehy_g30336 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Msp_g27158 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species
Pir_g62500 No alias not classified & original description: none 0.06 OrthoFinder output from all 39 species
Ppi_g53333 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Sam_g28096 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Spa_g37468 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Spa_g37617 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Zm00001e031425_P002 AML1, RPS5A,... component RPS5 of SSU proteome 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 53 193
No external refs found!