1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g278197

Cre06.g278197


Description : Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana


Gene families : OG0001045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001045_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g278197

Target Alias Description ECC score Gene Family Method Actions
AT4G33620 No alias Cysteine proteinases superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g008933 No alias protease *(SPF) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g14723 No alias protease *(SPF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21486 OTS2, ULP1C protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05361 No alias protease *(SPF) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46526.t1 Aspi01Gene46526 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.09G096300.1 Ceric.09G096300 protease *(OTS) & original description: pacid=50587006... 0.02 OrthoFinder output from all 47 species
Ceric.20G017000.1 Ceric.20G017000 not classified & original description: pacid=50566624... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.8 OTS2, ULP1C Probable ubiquitin-like-specific protease 2A... 0.02 OrthoFinder output from all 47 species
Dcu_g01742 OTS1, ULP1D protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09433 No alias protease *(SPF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26425 No alias protease *(SPF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020235001 OTS1, ULP1D Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
LOC_Os05g11770.1 LOC_Os05g11770 protease (SPF) 0.01 OrthoFinder output from all 47 species
LOC_Os06g29310.1 OTS1, ULP1D,... protease (OTS) 0.01 OrthoFinder output from all 47 species
LOC_Os12g41380.1 OTS2, ULP1C,... protease (OTS) 0.02 OrthoFinder output from all 47 species
Mp2g26300.1 No alias protease (SPF). protease (OTS) 0.01 OrthoFinder output from all 47 species
Pir_g11305 OTS2, ULP1C protease *(OTS) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g16073 No alias protease *(SPF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57115 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025803 OTS1, ULP1D protease *(OTS) & original description: CDS=141-1787 0.01 OrthoFinder output from all 47 species
Smo439571 No alias Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Spa_g55241 OTS2, ULP1C protease *(OTS) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g11560 No alias protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025272_P005 OTS2, ULP1C,... protease (OTS) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 423 685
No external refs found!