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  5. Cre06.g273100

Cre06.g273100


No description available


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g273100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00234390 AtGH9A4, GH9A4,... Endoglucanase 16 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00099p00070580 CEL5, ATGH9B4,... Endoglucanase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00071120 ATGH9B3, CEL3,... Cell wall.cellulose.degradation.endo-1,4-beta-glucanase 0.01 OrthoFinder output from all 47 species
AMTR_s00224p00023160 AtGH9B5, GH9B5,... Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.02 OrthoFinder output from all 47 species
AT2G44560 GH9B11, AtGH9B11 glycosyl hydrolase 9B11 0.01 OrthoFinder output from all 47 species
AT3G43860 AtGH9A4, GH9A4 glycosyl hydrolase 9A4 0.02 OrthoFinder output from all 47 species
Aev_g34408 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g41798 GH9B12, AtGH9B12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g57091 GH9B12, AtGH9B12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71907.t2 AtGH9C3, GH9C3,... class-C endo-1,4-beta-glucanase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.39G000600.1 AtGH9C1, GH9C1,... class-C endo-1,4-beta-glucanase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g08349 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07028 AtGH9B7, GH9B7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g51055 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08477 AtGH9B7, GH9B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018619001 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_15573 AtGH9B13, GH9B13 endo-1,4-beta-glucanase 0.01 OrthoFinder output from all 47 species
Gb_29204 AtGH9B6, GH9B6 Endoglucanase 4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_29209 ATCEL2, CEL2 Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
LOC_Os02g03120.1 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g36610.1 ATGH9B3, CEL3,... endo-1,4-beta-glucanase 0.01 OrthoFinder output from all 47 species
Len_g32093 AtGH9B5, GH9B5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_20530g0010 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_76986g0010 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g11107 AtGH9B5, GH9B5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g083820.3.1 CEL1, GH9B1,... Endoglucanase 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc11g040340.3.1 CEL5, ATGH9B4,... endo-1,4-beta-glucanase 0.01 OrthoFinder output from all 47 species
Zm00001e040931_P001 ATGH9B3, CEL3,... endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004302 Cellulose/chitin-bd_N 30 227
No external refs found!