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  5. Cre06.g271850

Cre06.g271850 (ATGCN5, GCN5)


Aliases : ATGCN5, GCN5

Description : ABC transporter F family member 5 OS=Arabidopsis thaliana


Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g271850

Target Alias Description ECC score Gene Family Method Actions
AT5G09930 ATGCN2, GCN2 ABC transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g057121 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g12591 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g04195 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g16234 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g02291 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0168.g054635 ATGCN5, GCN5 not classified & original description: CDS=239-2245 0.01 OrthoFinder output from all 47 species
Ceric.29G008900.1 ATGCN5, GCN5,... not classified & original description: pacid=50624672... 0.01 OrthoFinder output from all 47 species
Dde_g07651 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07903 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10437027g0010 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g14610 ATGCN5, GCN5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11528 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011297_P001 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 497 631
IPR003439 ABC_transporter-like_ATP-bd 151 327
IPR032781 ABC_tran_Xtn 369 441
IPR032524 ABC_tran_C 758 824
No external refs found!