LOC_Os12g44390 (Os12g0641500)


Aliases : Os12g0641500

Description : 31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN8 (TTN8)


Gene families : OG_01_0006182 (Gene family) Phylogenetic Tree(s): OG0006182_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g44390
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT3G54670 TTN8, ATSMC1, SMC1 Structural maintenance of chromosomes (SMC) family protein 0.07 Gene family
Cpa|evm.model.tig00020553.145 No alias 31.2 cell.division Encodes a member of the Arabidopsis... 0.01 Gene family
Cre15.g635800 No alias 31.2 cell.division Encodes a member of the Arabidopsis... 0.02 Gene family
GSVIVT01028343001 No alias 31.2 cell.division Encodes a member of the Arabidopsis... 0.1 Gene family
Solyc06g083870.3.1 Solyc06g083870.3 31.2 cell.division Encodes a member of the Arabidopsis... 0.05 Gene family
Zm00001d031847 GRMZM2G416069,... 31.2 cell.division Encodes a member of the Arabidopsis... 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0005694 chromosome IEA InterProScan
BP GO:0051276 chromosome organization IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010935 SMC_hinge 524 569
IPR003395 RecF/RecN/SMC_N 16 145
No external refs found!