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  5. Cre06.g266900

Cre06.g266900


Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g266900
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70838.t1 Aspi01Gene70838 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0092.g042977 No alias not classified & original description: CDS=66-1103 0.04 OrthoFinder output from all 47 species
Cba_g05162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.04 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09067 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g11518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430747g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_173127g0010 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g00347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013941 No alias not classified & original description: CDS=1-1122 0.01 OrthoFinder output from all 47 species
Sam_g11106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g063140.4.1 Solyc09g063140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 61 136
No external refs found!