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  5. Cre06.g252700

Cre06.g252700


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A2 component


Gene families : OG0006197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g252700

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0201.g057583 No alias component *(SF3A2) of splicing factor 3A complex &... 0.02 OrthoFinder output from all 47 species
Ceric.01G049300.1 Ceric.01G049300 component *(SF3A2) of splicing factor 3A complex &... 0.03 OrthoFinder output from all 47 species
MA_981g0010 No alias component SF3A2 of splicing factor 3A complex 0.02 OrthoFinder output from all 47 species
Nbi_g03446 No alias component *(SF3A2) of splicing factor 3A complex &... 0.02 OrthoFinder output from all 47 species
Solyc09g008470.4.1 Solyc09g008470 component SF3A2 of splicing factor 3A complex 0.04 OrthoFinder output from all 47 species
Zm00001e038524_P001 Zm00001e038524 component SF3A2 of splicing factor 3A complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031781 SF3A2_dom 113 207
No external refs found!