1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g251300

Cre06.g251300 (emb1644)


Aliases : emb1644

Description : RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm4 component


Gene families : OG0005093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g251300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00214370 emb1644,... RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 OrthoFinder output from all 47 species
Aop_g29927 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Ceric.34G061500.1 emb1644, Ceric.34G061500 component *(LSm4) of U6-associated LSm accessory... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000480.60 emb1644 RNA processing.RNA splicing.U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
Dcu_g13273 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.08 OrthoFinder output from all 47 species
GSVIVT01027986001 emb1644 RNA processing.RNA splicing.U6-associated LSm accessory... 0.08 OrthoFinder output from all 47 species
Tin_g12470 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.01 OrthoFinder output from all 47 species
Zm00001e017261_P001 emb1644, Zm00001e017261 component LSm4 of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 6 71
No external refs found!