LOC_Os04g52200.1


Description : no hits & (original description: none)


Gene families : OG_01_0004709 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004709_tree ,
OG_02_0005978 (LandPlants) Phylogenetic Tree(s): OG_02_0005978_tree ,
OG_03_0005881 (SeedPlants) Phylogenetic Tree(s): OG_03_0005881_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52200.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00256580 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cpa|evm.model.tig00000893.5 No alias No description available 0.02 Archaeplastida
Cre16.g685200 No alias No description available 0.07 Archaeplastida
GSVIVT01012163001 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
MA_514361g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g081940.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e041627_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042214_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
GSVIVT01012163001 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.06 LandPlants
MA_10427172g0010 No alias no hits & (original description: none) 0.01 LandPlants
Solyc02g081940.3.1 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e041627_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e042214_P001 No alias no hits & (original description: none) 0.03 LandPlants
GSVIVT01012163001 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.06 SeedPlants
MA_10427172g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc02g081940.3.1 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e041627_P001 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e042214_P001 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 684 758
IPR000504 RRM_dom 783 850
IPR000504 RRM_dom 376 440
IPR000504 RRM_dom 564 626
IPR000504 RRM_dom 25 93
No external refs found!