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  5. Cre06.g248950

Cre06.g248950 (UBP25)


Aliases : UBP25

Description : Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g248950

Target Alias Description ECC score Gene Family Method Actions
Aev_g21642 UBP19 regulatory deubiquitinase *(UBP15) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27664 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09366 UBP23 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g27096 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13254 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.8 UBP25 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Dac_g23037 UBP23 deubiquitinase *(UBP23) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g26398 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05817 UBP18 deubiquitinase (UBP15-21) 0.01 OrthoFinder output from all 47 species
MA_10431488g0010 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.01 OrthoFinder output from all 47 species
Pnu_g19055 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012859 UBP18 not classified & original description: CDS=628-2634 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012965 UBP25 component *(bL25m) of large mitoribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Solyc08g069050.3.1 UBP19, Solyc08g069050 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
Zm00001e015501_P001 UBP21, Zm00001e015501 Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 92 130
IPR001394 Peptidase_C19_UCH 304 695
No external refs found!