LOC_Os04g52190.1


Description : vacuolar sorting receptor (VSR)


Gene families : OG_01_0000827 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000827_tree ,
OG_02_0000669 (LandPlants) Phylogenetic Tree(s): OG_02_0000669_tree ,
OG_03_0000710 (SeedPlants) Phylogenetic Tree(s): OG_03_0000710_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52190.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT2G34940 VSR5, VSR3;2, BP80-3;2 VACUOLAR SORTING RECEPTOR 5 0.02 Archaeplastida
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.07 Archaeplastida
Mp7g13540.1 No alias vacuolar sorting receptor (VSR) 0.04 Archaeplastida
Pp3c1_1390V3.1 No alias vacuolar sorting receptor 4 0.02 Archaeplastida
Pp3c2_34820V3.1 No alias vaculolar sorting receptor 3 0.02 Archaeplastida
Solyc02g081970.4.1 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
Solyc10g074980.2.1 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
Zm00001e037729_P002 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
Zm00001e038238_P001 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.03 LandPlants
Mp7g13540.1 No alias vacuolar sorting receptor (VSR) 0.03 LandPlants
Solyc02g081970.4.1 No alias vacuolar sorting receptor (VSR) 0.02 LandPlants
Solyc10g074980.2.1 No alias vacuolar sorting receptor (VSR) 0.02 LandPlants
Zm00001e037729_P002 No alias vacuolar sorting receptor (VSR) 0.02 LandPlants
Zm00001e038238_P001 No alias vacuolar sorting receptor (VSR) 0.02 LandPlants
AMTR_s00032p00189440 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.01 SeedPlants
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.02 SeedPlants
Solyc10g074980.2.1 No alias vacuolar sorting receptor (VSR) 0.01 SeedPlants
Zm00001e037729_P002 No alias vacuolar sorting receptor (VSR) 0.02 SeedPlants
Zm00001e038238_P001 No alias vacuolar sorting receptor (VSR) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003137 PA_domain 61 165
No external refs found!