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  5. Cre05.g234661

Cre05.g234661


No description available


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre05.g234661
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species
AT3G28610 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species
Aob_g21682 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G072100.1 Ceric.19G072100 not classified & original description: pacid=50575999... 0.02 OrthoFinder output from all 47 species
Dac_g09976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_02166 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_27548 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os07g09480.1 LOC_Os07g09480 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10430798g0010 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10430798g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pir_g04536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017709 No alias not classified & original description: CDS=1-1293 0.01 OrthoFinder output from all 47 species
Solyc02g062550.3.1 BCS1, Solyc02g062550 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g080680.4.1 BCS1, Solyc04g080680 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 524 569
IPR003959 ATPase_AAA_core 297 373
No external refs found!