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  5. Cre05.g233551

Cre05.g233551


Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre05.g233551

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00211520 SPL4,... RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Adi_g077071 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g110150 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
Cre04.g212700 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Cre06.g278229 SPL15 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre07.g335150 SPL3 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre16.g673250 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre17.g698233 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 17 90
No external refs found!