LOC_Os12g42970 (Os12g0624900)


Aliases : Os12g0624900

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 2 (GATA2)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g42970
Cluster HCCA cluster: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT1G08000 GATA10 GATA transcription factor 10 0.02 Gene family
AT4G34680 GATA3 GATA transcription factor 3 0.02 Gene family
GSVIVT01015204001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os02g56250 Os02g0806300,... 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os06g37450 Os06g0571800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os10g32070 Os10g0458800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc03g033660.3.1 Solyc03g033660.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc04g015360.3.1 Solyc04g015360.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d029896 GRMZM2G113098 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d047081 GRMZM2G101058 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Zm00001d048391 GRMZM2G532534 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 239 273
No external refs found!