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  5. Cre04.g225850

Cre04.g225850 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-type protein


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g225850

Target Alias Description ECC score Gene Family Method Actions
AT3G54300 VAMP727, ATVAMP727 vesicle-associated membrane protein 727 0.01 OrthoFinder output from all 47 species
Adi_g009467 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Ala_g01359 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Als_g38555 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g009713 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Cba_g26748 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cba_g69182 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Dde_g00287 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
MA_92947g0030 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.01 OrthoFinder output from all 47 species
Ore_g42106 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001719 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Sam_g28377 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sam_g28378 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Solyc06g083530.3.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.06 OrthoFinder output from all 47 species
Zm00001e003924_P002 VAMP727,... VAMP7-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species
Zm00001e009585_P002 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 35 95
IPR001388 Synaptobrevin-like 127 212
No external refs found!