Cre04.g220850 (ATWBC11, ABCG11, DSO,...)

Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : ABC transporter G family member 11 OS=Arabidopsis thaliana

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre04.g220850
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
Adi_g107318	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02542	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g05454	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g18794	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene10922.t1	Aspi01Gene10922	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene22309.t1	Aspi01Gene22309	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.17G037500.1	Ceric.17G037500	subfamily ABCG transporter & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000605.36	No alias	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Dcu_g34069	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g47725	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01011981001	No alias	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
GSVIVT01014733001	ABCG26, WBC27	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_00289	ABCG26, WBC27	sporopollenin precursor exporter. subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Gb_31556	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Len_g37001	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g10128	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g13582	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g13835	ABCG26, WBC27	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g57469	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g63765	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g05719	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g06146	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g23153	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	HCCA
MF	GO:0047750	cholestenol delta-isomerase activity	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	407	616
IPR003439	ABC_transporter-like_ATP-bd	43	192

External Links

No external refs found!

Cre04.g220850 (ATWBC11, ABCG11, DSO,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation