Cre04.g212700

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre04.g212700

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g012200	SPL3	RNA biosynthesis.transcriptional activation.SBP...	0.01	OrthoFinder output from all 47 species
Cre01.g033900	SPL5	RNA biosynthesis.transcriptional activation.SBP...	0.05	OrthoFinder output from all 47 species
Cre01.g070932	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre02.g085150	SPL4	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre02.g110150	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre05.g233551	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
Cre06.g278229	SPL15	RNA biosynthesis.transcriptional activation.SBP...	0.11	OrthoFinder output from all 47 species
Cre10.g421550	SPL7, ATSPL7	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre16.g673250	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.01	OrthoFinder output from all 47 species
Cre16.g686100	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.05	OrthoFinder output from all 47 species
Cre16.g692500	AtSPL9, SPL9	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre17.g698233	SPL1	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	46	119

External Links

No external refs found!