Cre03.g207050

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL29 component

Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g207050

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00034600	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
AMTR_s03807p00002720	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
AT3G06680	No alias	Ribosomal L29e protein family	0.04	OrthoFinder output from all 47 species
AT3G06700	No alias	Ribosomal L29e protein family	0.04	OrthoFinder output from all 47 species
Als_g56710	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aob_g28821	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Aop_g28738	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0003.g007916	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.12	OrthoFinder output from all 47 species
Azfi_s0095.g043647	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.16	OrthoFinder output from all 47 species
Cba_g68190	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.22G077900.1	Ceric.22G077900	component *(eL29) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.39G032900.1	Ceric.39G032900	component *(eL29) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000269.24	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g14001	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Dcu_g28682	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g48563	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ehy_g11244	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ehy_g19325	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ehy_g23105	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
GSVIVT01028108001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
GSVIVT01035023001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder output from all 47 species
Gb_37735	No alias	component RPL29 of LSU proteome component	0.16	OrthoFinder output from all 47 species
LOC_Os01g19840.1	LOC_Os01g19840	component RPL29 of LSU proteome component	0.05	OrthoFinder output from all 47 species
LOC_Os05g28750.1	LOC_Os05g28750	component RPL29 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Len_g34825	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Len_g34826	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Lfl_g18113	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
MA_10433318g0010	No alias	component RPL29 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp1g23580.1	No alias	component RPL29 of LSU proteome component	0.09	OrthoFinder output from all 47 species
Pp3c14_7570V3.1	Pp3c14_7570	Ribosomal L29e protein family	0.15	OrthoFinder output from all 47 species
Pp3c1_34380V3.1	Pp3c1_34380	Ribosomal L29e protein family	0.12	OrthoFinder output from all 47 species
Ppi_g34065	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g58254	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sam_g17848	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Smo228166	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	OrthoFinder output from all 47 species
Solyc05g053440.4.1	Solyc05g053440	component RPL29 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g43144	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002673	Ribosomal_L29e	3	42

External Links

No external refs found!

Cre03.g207050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation