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  5. Cre03.g204750

Cre03.g204750


No description available


Gene families : OG0005498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g204750

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00202800 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Aob_g17817 No alias chaperone component *(SEN54) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0033.g025008 No alias chaperone component *(SEN54) & original description: CDS=131-922 0.01 OrthoFinder output from all 47 species
LOC_Os09g32700.1 LOC_Os09g32700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g46201 No alias chaperone component *(SEN54) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10437030g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp3g01270.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g18004 No alias chaperone component *(SEN54) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g096220.3.1 Solyc03g096220 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024336 tRNA_splic_suSen54_N 47 102
No external refs found!