LOC_Os12g41900 (Os12g0613200)


Aliases : Os12g0613200

Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C. SET domain protein 25 (SDG25)


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g41900
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.09 Gene family
AT5G53430 SET29, SDG29, ATX5 SET domain group 29 0.03 Gene family
GSVIVT01018567001 No alias No description available 0.01 Gene family
GSVIVT01027118001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
GSVIVT01038708001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
MA_18041g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Smo164635 PACid_15412034 No description available 0.02 Gene family
Solyc01g095890.3.1 Solyc01g095890.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Solyc03g083410.3.1 Solyc03g083410.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
Zm00001d023333 GRMZM2G473138 27.3.69 RNA.regulation of transcription.SET-domain... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 1085 1189
No external refs found!