LOC_Os04g50070.1


Description : C2H2 zinc finger transcription factor


Gene families : OG_01_0000055 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000055_tree ,
OG_02_0000021 (LandPlants) Phylogenetic Tree(s): OG_02_0000021_tree ,
OG_03_0000388 (SeedPlants) Phylogenetic Tree(s): OG_03_0000388_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g50070.1
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00012p00258820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00024p00186840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.08 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.04 Archaeplastida
AT5G05120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01027720001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_04808 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_07777 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_25685 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g009170.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
AMTR_s00001p00272910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.04 LandPlants
AMTR_s00024p00186840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 LandPlants
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AT1G24625 ZFP7 zinc finger protein 7 0.04 LandPlants
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 LandPlants
AT3G09290 TAC1 telomerase activator1 0.03 LandPlants
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 LandPlants
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
Gb_15338 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Gb_25685 No alias C2H2 zinc finger transcription factor 0.07 LandPlants
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
LOC_Os02g08510.1 No alias C2H2 zinc finger transcription factor 0.05 LandPlants
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.04 LandPlants
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.04 LandPlants
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.02 SeedPlants
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 SeedPlants
AT3G09290 TAC1 telomerase activator1 0.02 SeedPlants
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.01 SeedPlants
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!