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  5. Cre03.g188500

Cre03.g188500 (CHMP1A, VPS46.2)


Aliases : CHMP1A, VPS46.2

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS46/CHMP1 associated protein


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g188500

Target Alias Description ECC score Gene Family Method Actions
Aev_g05815 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.01 OrthoFinder output from all 47 species
Als_g13182 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.01 OrthoFinder output from all 47 species
Als_g37412 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Aop_g09097 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene43279.t1 CHMP1A, VPS46.2,... associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Ceric.28G030800.1 CHMP1A, VPS46.2,... associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.72 CHMP1B, VPS46.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder output from all 47 species
Dcu_g22693 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
MA_31546g0010 CHMP1A, VPS46.2 VPS46/CHMP1 associated protein of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Ore_g06310 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Ore_g25415 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.04 OrthoFinder output from all 47 species
Ppi_g40226 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.01 OrthoFinder output from all 47 species
Sam_g24265 No alias associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 173
No external refs found!