LOC_Os12g41680 (Os12g0610600)


Aliases : Os12g0610600

Description : 27.3.27 RNA.regulation of transcription.NAC domain transcription factor family Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). NAC1 (NAC1) NAC domain containing protein 1 (NAC1)


Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g41680
Cluster HCCA cluster: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT3G04060 anac046, NAC046 NAC domain containing protein 46 0.04 Gene family
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.02 Gene family
AT5G07680 ANAC080,... NAC domain containing protein 80 0.02 Gene family
AT5G22290 NAC089, anac089 NAC domain containing protein 89 0.02 Gene family
AT5G39610 NAC2, ORE1,... NAC domain containing protein 6 0.07 Gene family
AT5G61430 ANAC100, ATNAC5, NAC100 NAC domain containing protein 100 0.02 Gene family
LOC_Os02g42970 Os02g0643600 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc06g069710.3.1 Solyc06g069710.3 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d002934 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Zm00001d006053 GRMZM2G008374 33.99 development.unspecified Arabidopsis NAC domain... 0.03 Gene family
Zm00001d020982 GRMZM2G386163 33.99 development.unspecified Arabidopsis NAC domain... 0.04 Gene family
Zm00001d041472 GRMZM2G114850 27.3.27 RNA.regulation of transcription.NAC domain... 0.02 Gene family
Zm00001d048456 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 15 142
No external refs found!