1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre03.g187700

Cre03.g187700


Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.HRQ1 crosslink repair helicase


Gene families : OG0004571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004571_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g187700
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aev_g28559 No alias crosslink repair helicase *(HRQ1) & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os07g41564.1 LOC_Os07g41564 crosslink repair helicase (HRQ1) 0.01 OrthoFinder output from all 47 species
MA_10437054g0020 No alias crosslink repair helicase (HRQ1) 0.02 OrthoFinder output from all 47 species
MA_10437225g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR018973 MZB 2921 3004
IPR001650 Helicase_C 2337 2444
IPR011545 DEAD/DEAH_box_helicase_dom 1568 1753
No external refs found!