Cre03.g182600

Description : Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.HDC1/Rxt3 associated component

Gene families : OG0004198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004198_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g182600

Target	Alias	Description	ECC score	Gene Family Method
Aop_g08335	No alias	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene47291.t2	Aspi01Gene47291	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Ceric.37G025500.1	Ceric.37G025500	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Lfl_g10369	No alias	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Mp3g12140.1	No alias	associated component HDC1/Rxt3 of histone deacetylase machineries	0.01	OrthoFinder output from all 47 species
Ppi_g03202	No alias	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Solyc05g056340.3.1	Solyc05g056340	associated component HDC1/Rxt3 of histone deacetylase machineries	0.02	OrthoFinder output from all 47 species
Tin_g13819	No alias	associated component *(HDC1) of histone deacetylase...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006476	protein deacetylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016575	histone deacetylation	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0035601	protein deacylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098732	macromolecule deacylation	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
CC	GO:0031248	protein acetyltransferase complex	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902493	acetyltransferase complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013951	Rxt3	44	77

External Links

No external refs found!