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  5. Cre03.g178950

Cre03.g178950 (RECQI1)


Aliases : RECQI1

Description : ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g178950
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene18065.t1 RECQI1, Aspi01Gene18065 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08699 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os04g35420.1 ATRECQ4A,... helicase component RecQ4A of RTR Holliday junction... 0.02 OrthoFinder output from all 47 species
Len_g56734 RECQI1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10435954g0010 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436537g0010 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.02 OrthoFinder output from all 47 species
MA_18319g0020 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_361558g0010 ATRECQ4A, ATSGS1, RECQ4A ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp4g14290.1 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.03 OrthoFinder output from all 47 species
Mp4g16510.1 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g21318 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.01 OrthoFinder output from all 47 species
Msp_g27927 RECQI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41299 RECQI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100280.4.1 RECQI1, Solyc01g100280 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g103960.3.1 ATRECQ4A,... helicase component RecQ4A of RTR Holliday junction... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR032284 RecQ_Zn-bd 583 647
IPR001650 Helicase_C 463 569
IPR011545 DEAD/DEAH_box_helicase_dom 245 417
No external refs found!