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  5. Cre03.g173900

Cre03.g173900


Description : Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana


Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g173900

Target Alias Description ECC score Gene Family Method Actions
AT5G03200 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G19080 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g015806 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g094403 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g26061 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11454.t1 Aspi01Gene11454 E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g05278 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11051 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015098 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: CDS=1-966 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!