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  5. Cre03.g160000

Cre03.g160000 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g160000

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene15031.t1 ATHDA5, HDA05,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060221 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=93-1925 0.02 OrthoFinder output from all 47 species
Cba_g15038 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G070600.1 ATHDA15, HDA15,... class-II histone deacetylase & original description:... 0.02 OrthoFinder output from all 47 species
Pir_g18255 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009048 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=178-1890 0.01 OrthoFinder output from all 47 species
Spa_g19295 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08286 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 1121 1459
No external refs found!