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  5. Cre03.g159500

Cre03.g159500


Description : Polyamine metabolism.putrescine.synthesis.cytosolic pathway.ornithine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g159500

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00164800 evm_27.TU.AmTr_v1... Polyamine metabolism.putrescine.synthesis.cytosolic... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00139140 SAMDC4, BUD2,... Polyamine... 0.03 OrthoFinder output from all 47 species
Aev_g37641 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18258 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g57527 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35242 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001379 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=1-2412 0.01 OrthoFinder output from all 47 species
Cba_g61764 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G041400.1 SAMDC, Ceric.34G041400 EC_4.1 carbon-carbon lyase & original description:... 0.01 OrthoFinder output from all 47 species
Ehy_g02761 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Smo106449 No alias Polyamine... 0.02 OrthoFinder output from all 47 species
Smo232921 No alias Polyamine metabolism.putrescine.synthesis.cytosolic... 0.02 OrthoFinder output from all 47 species
Spa_g33024 No alias ornithine decarboxylase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 578 679
IPR022644 De-COase2_N 346 577
No external refs found!