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  5. LOC_Os04g49160.1

LOC_Os04g49160.1


Description : no hits & (original description: none)


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000175 (LandPlants) Phylogenetic Tree(s): OG_02_0000175_tree ,
OG_03_0000116 (SeedPlants) Phylogenetic Tree(s): OG_03_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g49160.1
Cluster HCCA: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00044p00221710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.02 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G53820 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.05 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G57750 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre01.g009101 No alias No description available 0.02 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020210001 No alias No description available 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01026978001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.03 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_32878 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.06 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g57460.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g42610.1 No alias E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1115518g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_159453g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_222729g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_229590g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_2639751g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_63503g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8556123g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp1g19680.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc04g007500.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc04g082690.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g064440.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc10g081780.3.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g010330.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e016092_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e023260_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
AT1G67856 No alias RING/U-box superfamily protein 0.02 LandPlants
AT3G43430 No alias RING/U-box superfamily protein 0.03 LandPlants
AT3G51325 No alias RING/U-box superfamily protein 0.04 LandPlants
AT4G00305 No alias RING/U-box superfamily protein 0.02 LandPlants
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 LandPlants
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 LandPlants
MA_10145129g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_133839g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_7120568g0010 No alias no hits & (original description: none) 0.03 LandPlants
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e021729_P001 No alias no hits & (original description: none) 0.02 LandPlants
AT3G51325 No alias RING/U-box superfamily protein 0.02 SeedPlants
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 SeedPlants
Zm00001e021729_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 100 144
No external refs found!