Aliases : Os12g0601400
Description : 27.3.40 RNA.regulation of transcription.Aux/IAA family SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro. SHORT HYPOCOTYL 2 (SHY2)
Gene families : OG_01_0000182 (Gene family) Phylogenetic Tree(s): OG0000182_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): LOC_Os12g40900 | |
Cluster | HCCA cluster: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G15580 | ATAUX2-27, AUX2-27, IAA5 | indole-3-acetic acid inducible 5 | 0.02 | Gene family | |
AT4G14550 | SLR, IAA14 | indole-3-acetic acid inducible 14 | 0.04 | Gene family | |
AT4G14560 | IAA1, AXR5 | indole-3-acetic acid inducible | 0.04 | Gene family | |
AT4G29080 | IAA27, PAP2 | phytochrome-associated protein 2 | 0.02 | Gene family | |
GSVIVT01015350001 | No alias | 30.11 signalling.light phytochrome-associated protein 2... | 0.02 | Gene family | |
GSVIVT01018101001 | No alias | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.02 | Gene family | |
GSVIVT01021779001 | No alias | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.03 | Gene family | |
LOC_Os12g40890 | Os12g0601300 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.03 | Gene family | |
Solyc06g008580.3.1 | Solyc06g008580.3 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.02 | Gene family | |
Zm00001d009532 | GRMZM2G573324 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.02 | Gene family | |
Zm00001d011588 | GRMZM2G163848 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.02 | Gene family | |
Zm00001d013071 | GRMZM2G152796 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.02 | Gene family | |
Zm00001d033319 | GRMZM2G366373 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.07 | Gene family | |
Zm00001d033976 | GRMZM2G159285 | 27.3.40 RNA.regulation of transcription.Aux/IAA family... | 0.05 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR033389 | AUX/IAA_dom | 40 | 193 |
No external refs found! |