1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre03.g149400

Cre03.g149400


Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g149400

Target Alias Description ECC score Gene Family Method Actions
Adi_g019525 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Adi_g076961 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Aob_g29859 No alias germ cell differentiation factor *(RKD) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene71267.t1 Aspi01Gene71267 germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007535 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G040500.1 Ceric.11G040500 germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Ceric.27G027000.1 Ceric.27G027000 germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001443.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre01.g004600 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.03 OrthoFinder output from all 47 species
Dde_g16879 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01038562001 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
Len_g30346 No alias RKD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g39038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14926 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Sam_g49284 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Sam_g51114 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 1883 1930
No external refs found!