LOC_Os12g40260 (Os12g0594000)


Aliases : Os12g0594000

Description : 28.1 DNA.synthesis/chromatin structure Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000208 (Gene family) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g40260
Cluster HCCA cluster: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT1G24530 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Gene family
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.11 Gene family
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Gene family
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Gene family
GSVIVT01031882001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
GSVIVT01035639001 No alias 31.1 cell.organisation Transducin/WD40 repeat-like... 0.02 Gene family
LOC_Os01g13140 Os01g0232200 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
MA_19051g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Solyc01g068250.2.1 Solyc01g068250.2 31.1 cell.organisation Transducin/WD40 repeat-like... 0.03 Gene family
Solyc01g109120.3.1 Solyc01g109120.3 28.1 DNA.synthesis/chromatin structure Transducin/WD40... 0.03 Gene family
Solyc02g090150.1.1 Solyc02g090150.1 31.1 cell.organisation Transducin/WD40 repeat-like... 0.02 Gene family
Solyc03g044830.3.1 Solyc03g044830.3 31.1 cell.organisation Transducin/WD40 repeat-like... 0.02 Gene family
Solyc07g025140.3.1 Solyc07g025140.3 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Zm00001d003272 GRMZM2G022627 35.1 not assigned.no ontology Transducin/WD40... 0.04 Gene family
Zm00001d025699 GRMZM2G051852 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 381 422
IPR001680 WD40_repeat 203 231
IPR001680 WD40_repeat 340 370
IPR001680 WD40_repeat 237 273
No external refs found!