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  5. Cre02.g142850

Cre02.g142850


Description : RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm8 component


Gene families : OG0008386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g142850

Target Alias Description ECC score Gene Family Method Actions
Ceric.02G003500.1 Ceric.02G003500 component *(LSm8) of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
GSVIVT01024237001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51650.1 LOC_Os05g51650 component LSm8 of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
MA_10432368g0010 No alias component LSm8 of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Mp4g00350.1 No alias component LSm8 of U6-associated LSm accessory... 0.07 OrthoFinder output from all 47 species
Pp3c5_26940V3.1 Pp3c5_26940 Small nuclear ribonucleoprotein family protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 7 75
No external refs found!