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  5. Cre02.g118300

Cre02.g118300 (PRH75)


Aliases : PRH75

Description : DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g118300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00127820 PMH2, ATRH53,... RNA processing.organelle machineries.RNA... 0.01 OrthoFinder output from all 47 species
AT5G62190 PRH75 DEAD box RNA helicase (PRH75) 0.02 OrthoFinder output from all 47 species
Ala_g14982 PRH75 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05682 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.01 OrthoFinder output from all 47 species
Als_g14234 PRH75 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g38162 PRH75 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g04482 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.01 OrthoFinder output from all 47 species
Aop_g08480 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72752.t1 PRH75, Aspi01Gene72752 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0022.g016145 PRH75 not classified & original description: CDS=1-2178 0.01 OrthoFinder output from all 47 species
Ceric.01G054800.1 PRH75, Ceric.01G054800 not classified & original description: pacid=50590947... 0.01 OrthoFinder output from all 47 species
Ceric.17G055300.1 emb1138, Ceric.17G055300 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08211 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08659 PRH75 not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os09g34910.1 PRH75, LOC_Os09g34910 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g06681 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.01 OrthoFinder output from all 47 species
MA_17924g0020 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.01 OrthoFinder output from all 47 species
Mp2g07080.1 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Msp_g01214 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10755 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13082 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.01 OrthoFinder output from all 47 species
Msp_g38928 PRH75 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g24589 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10670 PRH75 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g05277 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.01 OrthoFinder output from all 47 species
Smo150370 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Solyc06g035450.4.1 PRH75, Solyc06g035450 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.02 OrthoFinder output from all 47 species
Zm00001e003219_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species
Zm00001e010187_P002 PRH75, Zm00001e010187 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e018107_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species
Zm00001e034728_P002 PRH75, Zm00001e034728 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 350 454
IPR012562 GUCT 547 645
IPR011545 DEAD/DEAH_box_helicase_dom 128 306
No external refs found!