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  5. Cre02.g111000

Cre02.g111000


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT beta-1,2-arabinosyltransferase


Gene families : OG0003060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g111000

Target Alias Description ECC score Gene Family Method Actions
AT1G19360 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g006514 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.01 OrthoFinder output from all 47 species
Adi_g108829 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Ala_g14117 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.01 OrthoFinder output from all 47 species
Cba_g06298 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.01 OrthoFinder output from all 47 species
Cba_g10361 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.13 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g288500 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
GSVIVT01009666001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01031309001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
MA_54369g0010 No alias arabinosyltransferase (RRA). extensin... 0.02 OrthoFinder output from all 47 species
Mp3g12220.1 No alias arabinosyltransferase (RRA). extensin... 0.03 OrthoFinder output from all 47 species
Msp_g04569 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Smo103279 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Spa_g09327 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e002088_P003 Zm00001e002088 arabinosyltransferase (RRA). extensin... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 76 294
No external refs found!