Cre02.g101950

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor

Gene families : OG0005342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005342_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g101950

Target	Alias	Description	ECC score	Gene Family Method
Aop_g04617	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Gb_23411	No alias	C3H zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os04g01480.1	LOC_Os04g01480	C3H zinc finger transcription factor	0.06	OrthoFinder output from all 47 species
MA_10432089g0010	No alias	Zinc finger CCCH domain-containing protein 24...	0.02	OrthoFinder output from all 47 species
MA_10435191g0020	No alias	C3H zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Mp5g00110.1	No alias	C3H zinc finger transcription factor	0.07	OrthoFinder output from all 47 species
Sam_g25094	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g069340.2.1	Solyc11g069340	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e008813_P001	Zm00001e008813	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010280	U5_MeTrfase_fam	596	749

External Links

No external refs found!