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  5. Cre02.g101350

Cre02.g101350


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10a component


Gene families : OG0000113 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g101350
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g005355 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Adi_g018053 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g023588 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g036393 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Adi_g048863 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Adi_g066884 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g099081 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Adi_g117922 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Als_g48458 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Als_g56801 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Als_g57036 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Aob_g15332 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Aop_g19481 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Aop_g22814 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Aop_g27664 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Cba_g23394 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Cba_g70629 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Dcu_g23060 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Dde_g31781 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 39 species
Dde_g39247 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Dde_g45664 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ehy_g18006 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g22550 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g32012 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g35709 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g36174 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Pir_g62662 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Ppi_g12367 No alias not classified & original description: none 0.05 OrthoFinder output from all 39 species
Ppi_g17219 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g28900 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Ppi_g44847 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g48279 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Spa_g40753 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Tin_g40404 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 21 208
No external refs found!