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  5. Cre02.g098200

Cre02.g098200 (PRT1)


Aliases : PRT1

Description : Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-II-residues E3 ubiquitin ligase (PRT1)


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g098200
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT3G24800 PRT1 proteolysis 1 0.01 OrthoFinder output from all 47 species
Adi_g058661 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g09414 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.01 OrthoFinder output from all 47 species
Solyc09g091790.3.1 PRT1, Solyc09g091790 type-II-residues E3 ubiquitin ligase (PRT1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 423 458
No external refs found!