Cre02.g091400 (CLPB4, CLPB-M, HSP98.7)

Aliases : CLPB4, CLPB-M, HSP98.7

Description : Chaperone protein ClpB4, mitochondrial OS=Arabidopsis thaliana

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g091400

Target	Alias	Description	ECC score	Gene Family Method
Als_g63134	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.01	OrthoFinder output from all 47 species
Aob_g07406	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Aob_g16301	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Cba_g04072	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001416.4	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Dcu_g08738	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g05637	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.01	OrthoFinder output from all 47 species
Ore_g13933	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19845	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	999	1122
IPR003959	ATPase_AAA_core	125	256

External Links

No external refs found!