Aliases : SPL4
Description : RNA biosynthesis.transcriptional activation.SBP transcription factor
Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre02.g085150 | |
Cluster | HCCA: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G53160 | SPL4 | squamosa promoter binding protein-like 4 | 0.01 | OrthoFinder output from all 47 species | |
Adi_g029308 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Adi_g088745 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g38647 | SPL8 | SBP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Cba_g26615 | SPL2 | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.23G013900.1 | SPL8, Ceric.23G013900 | SBP-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.39G052200.1 | SPL8, Ceric.39G052200 | SBP-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cre01.g033900 | SPL5 | RNA biosynthesis.transcriptional activation.SBP... | 0.03 | OrthoFinder output from all 47 species | |
Cre01.g070932 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.03 | OrthoFinder output from all 47 species | |
Cre04.g212700 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01021087001 | SPL3 | RNA biosynthesis.transcriptional activation.SBP... | 0.01 | OrthoFinder output from all 47 species | |
Gb_03920 | SPL8 | transcription factor (SBP) | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g34701 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g33008 | SPL2 | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g18143 | SPL3 | SBP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e013198_P001 | SPL2, Zm00001e013198 | transcription factor (SBP) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e021425_P001 | SPL13, SPL13A,... | transcription factor (SBP) | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004333 | SBP_dom | 93 | 163 |
No external refs found! |