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No description available
Gene families : OG0007234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007234_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre02.g081250 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00257120 | PTAC16,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.09 | OrthoFinder output from all 47 species | |
| AT3G46780 | PTAC16 | plastid transcriptionally active 16 | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g011791 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g02347 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09140 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g03152 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18050 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g68943 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene18545.t1 | PTAC16, Aspi01Gene18545 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0072.g036982 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03987 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G051100.1 | PTAC16, Ceric.19G051100 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.12 | OrthoFinder output from all 47 species | |
| Dac_g08836 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g01601 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g25352 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g03814 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024905001 | PTAC16 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_02666 | PTAC16 | TAC16 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g22614.1 | PTAC16, LOC_Os05g22614 | TAC16 cofactor of plastid-encoded RNA polymerase | 0.07 | OrthoFinder output from all 47 species | |
| Len_g15964 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g39154 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_806g0020 | PTAC16 | TAC16 cofactor of plastid-encoded RNA polymerase | 0.08 | OrthoFinder output from all 47 species | |
| Mp8g16460.1 | PTAC16 | TAC16 cofactor of plastid-encoded RNA polymerase | 0.11 | OrthoFinder output from all 47 species | |
| Nbi_g10293 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g05533 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g05534 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g07718 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0058.g014956 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g005710.3.1 | PTAC16, Solyc06g005710 | TAC16 cofactor of plastid-encoded RNA polymerase | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g56471 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08369 | PTAC16 | cofactor of plastid-encoded RNA polymerase *(TAC16) &... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e026770_P002 | PTAC16, Zm00001e026770 | TAC16 cofactor of plastid-encoded RNA polymerase | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | HCCA |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016744 | transketolase or transaldolase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |