Cre02.g078150


No description available


Gene families : OG0001886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001886_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g078150

Target Alias Description ECC score Gene Family Method Actions
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.03 OrthoFinder output from all 47 species
Adi_g074760 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g13611 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Aev_g18824 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ala_g21580 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g48705 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g40174 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.1Z073200.1 Ceric.1Z073200 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.30 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Dcu_g03214 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dcu_g12050 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
GSVIVT01028117001 No alias Dynein assembly factor with WDR repeat domains 1... 0.01 OrthoFinder output from all 47 species
GSVIVT01035014001 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Gb_35200 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
LOC_Os03g19340.1 LOC_Os03g19340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g11003 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Lfl_g38764 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_10430074g0010 No alias Dynein assembly factor with WDR repeat domains 1... 0.01 OrthoFinder output from all 47 species
MA_58934g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g38962 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g44688 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g07287 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g08815 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g16205 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40587 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g060040.3.1 Solyc01g060040 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc01g060050.3.1 Solyc01g060050 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Solyc01g079510.3.1 Solyc01g079510 Dynein assembly factor with WDR repeat domains 1... 0.01 OrthoFinder output from all 47 species
Zm00001e025834_P004 Zm00001e025834 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 1942 1995
IPR001680 WD40_repeat 210 246
IPR001680 WD40_repeat 252 288
IPR001680 WD40_repeat 534 557
IPR001680 WD40_repeat 799 830
IPR001680 WD40_repeat 295 333
No external refs found!