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  5. Cre01.g039250

Cre01.g039250


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS2 component


Gene families : OG0000199 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g039250
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.135 XW6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 100 164
IPR005324 Ribosomal_S5_C 183 254
No external refs found!