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  5. Cre01.g034350

Cre01.g034350 (PGA37, ATMYB118, MYB118)


Aliases : PGA37, ATMYB118, MYB118

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g034350
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264600 AtMYB117, LOF1,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
AT2G02820 MYB88, AtMYB88 myb domain protein 88 0.01 OrthoFinder output from all 47 species
AT2G13960 No alias Homeodomain-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.01 OrthoFinder output from all 47 species
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.01 OrthoFinder output from all 47 species
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.02 OrthoFinder output from all 47 species
Als_g18058 MYB3R-3, AtMYB3R3 R1R2R3-MYB transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g31133 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aob_g30670 AtMYB109, MYB109 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49877.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0103.g044681 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.01 OrthoFinder output from all 47 species
Ceric.01G063500.1 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.01 OrthoFinder output from all 47 species
Dde_g02900 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.01 OrthoFinder output from all 47 species
Gb_23308 AtMYB98, MYB98 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Ore_g20758 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g22011 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Smo99462 MYB70, AtMYB70 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Solyc12g088610.1.1 MYB73, ATMYB73,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g05755 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 19 73
IPR001005 SANT/Myb 80 122
No external refs found!