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  5. Cre01.g033900

Cre01.g033900 (SPL5)


Aliases : SPL5

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g033900

Target Alias Description ECC score Gene Family Method Actions
Cre01.g070932 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Cre02.g085150 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre04.g212700 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
Cre06.g278229 SPL15 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Cre16.g673250 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Cre16.g686100 No alias RNA biosynthesis.transcriptional activation.SBP... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0005044 scavenger receptor activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0038024 cargo receptor activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 51 122
No external refs found!