Cre01.g023787 (ATGCN1, GCN1)

Aliases : ATGCN1, GCN1

Description : ABC transporter F family member 1 OS=Arabidopsis thaliana

Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g023787

Target	Alias	Description	ECC score	Gene Family Method
Ceric.12G026600.1	ATGCN1, GCN1,...	not classified & original description: pacid=50600930...	0.02	OrthoFinder output from all 47 species
Ceric.15G013900.1	ATGCN1, GCN1,...	not classified & original description: pacid=50640581...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000383.51	ATGCN1, GCN1	ABC transporter F family member 1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Ehy_g06018	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01031505001	ATGCN1, GCN1	ABC transporter F family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
LOC_Os08g45010.1	ATGCN1, GCN1,...	ABC transporter F family member 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp6g18410.1	ATGCN1, GCN1	ABC transporter F family member 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015649	ATGCN1, GCN1	not classified & original description: CDS=120-2102	0.02	OrthoFinder output from all 47 species
Zm00001e017809_P001	ATGCN1, GCN1,...	ABC transporter F family member 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	111	268
IPR032781	ABC_tran_Xtn	307	350

External Links

No external refs found!