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  5. Cre01.g023400

Cre01.g023400


Description : LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g023400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00244850 evm_27.TU.AmTr_v1... LIMR family protein At3g08930 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT3G08930 No alias LMBR1-like membrane protein 0.02 OrthoFinder output from all 47 species
Adi_g055076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011127 No alias not classified & original description: CDS=78-1616 0.01 OrthoFinder output from all 47 species
Ceric.34G014800.1 Ceric.34G014800 not classified & original description: pacid=50622851... 0.01 OrthoFinder output from all 47 species
Dde_g01606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01033959001 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Lfl_g01995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10078g0020 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp5g20730.1 No alias LIMR family protein At3g08930 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g02525 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15699 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015838 No alias not classified & original description: CDS=270-1811 0.01 OrthoFinder output from all 47 species
Smo75198 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Zm00001e029882_P001 Zm00001e029882 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Zm00001e036634_P001 Zm00001e036634 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 317 529
IPR006876 LMBR1-like_membr_prot 45 293
No external refs found!