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  5. Cre01.g021600

Cre01.g021600 (ATDRH1, DRH1)


Aliases : ATDRH1, DRH1

Description : DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g021600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00050700 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Adi_g020036 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06076 ATDRH1, DRH1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g15083 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.01 OrthoFinder output from all 47 species
Aob_g11417 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Aop_g09685 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Aop_g10872 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15248.t1 ATDRH1, DRH1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63146.t1 ATDRH1, DRH1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63146.t2 ATDRH1, DRH1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015531 ATDRH1, DRH1 not classified & original description: CDS=33-2831 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.35 No alias DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Dac_g12501 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41933 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.02 OrthoFinder output from all 47 species
Dde_g17414 ATDRH1, DRH1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g16807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38298 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5118g0010 ATDRH1, DRH1 ATP-dependent RNA helicase-like protein DB10... 0.01 OrthoFinder output from all 47 species
Mp1g25330.1 ATDRH1, DRH1 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Msp_g07173 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Ore_g02786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12189 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g035130.2.1 ATDRH1, DRH1,... ATP-dependent RNA helicase-like protein DB10... 0.07 OrthoFinder output from all 47 species
Spa_g57013 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020972_P005 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001202 WW_dom 12 42
IPR001650 Helicase_C 359 467
IPR011545 DEAD/DEAH_box_helicase_dom 149 318
No external refs found!